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Download Msmc | Maps From Here (click On This Text)
MSMC is a Hidden Markov Model (HMM) that utilizes the density of (genotypes where alleles differ) to estimate the time to the most recent common ancestor (TMRCA).
: Convert raw genomic data into VCF and mask files. Combine Samples : Aggregate data from multiple individuals. Download MSMC Maps from Here (Click on this text)
: Because MSMC needs to know which regions of the genome could actually be called (filtering for quality and coverage), users must provide a Mask-file to exclude unreliable data. MSMC is a Hidden Markov Model (HMM) that
: By comparing coalescence rates within and across pairs of populations, MSMC-IM can track how and when groups diverged. Download MSMC Maps from Here (Click on this text)
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